A resource of 5,814 Dissociation transposon-tagged and sequence-indexed lines of Arabidopsis Transposed from start loci on chromosome 5

Takuya Ito; Reiko Motohashi; Takashi Kuromori; Yoshiteru Noutoshi; Motoaki Seki; Asako Kamiya; Saho Mizukado; Tetsuya Sakurai; Kazuo Shinozaki

doi:10.1093/pcp/pci112

A resource of 5,814 Dissociation transposon-tagged and sequence-indexed lines of Arabidopsis Transposed from start loci on chromosome 5

Takuya Ito, Reiko Motohashi, Takashi Kuromori, Yoshiteru Noutoshi, Motoaki Seki, Asako Kamiya, Saho Mizukado, Tetsuya Sakurai, Kazuo Shinozaki

Research output: Contribution to journal › Article › peer-review

48 Citations (Scopus)

Abstract

We report here the generation of an additional collection of Dissociation (Ds) transposon-tagged, sequence-indexed lines of Arabidopsis thaliana. Our RIKEN Ds insertion collection now totals 17,668 lines. Our collection has preferential insertions in chromosomes 1 and 5, because Ds was transposed from start loci on those chromosomes (11,854 and 5,814 lines, respectively). We describe here features of the latter 5,814 lines. The former 11,854 lines have been described previously. We have created a searchable database of the insertion sites and mutated genes (http:// rarge.gsc.riken.jp/), and are depositing these lines in the RIKEN BioResource Center (http://www.brc.riken.go. jp/ lab/epd/Eng/). Our collection of these mutants will contribute to progress in functional genomics of plants. JSPP

Original language	English
Pages (from-to)	1149-1153
Number of pages	5
Journal	Plant and Cell Physiology
Volume	46
Issue number	7
DOIs	https://doi.org/10.1093/pcp/pci112
Publication status	Published - Jul 2005
Externally published	Yes

Keywords

Ac/Ds
Arabidopsis thaliana
Functional genomics

ASJC Scopus subject areas

Physiology
Plant Science
Cell Biology

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10.1093/pcp/pci112

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title = "A resource of 5,814 Dissociation transposon-tagged and sequence-indexed lines of Arabidopsis Transposed from start loci on chromosome 5",

abstract = "We report here the generation of an additional collection of Dissociation (Ds) transposon-tagged, sequence-indexed lines of Arabidopsis thaliana. Our RIKEN Ds insertion collection now totals 17,668 lines. Our collection has preferential insertions in chromosomes 1 and 5, because Ds was transposed from start loci on those chromosomes (11,854 and 5,814 lines, respectively). We describe here features of the latter 5,814 lines. The former 11,854 lines have been described previously. We have created a searchable database of the insertion sites and mutated genes (http:// rarge.gsc.riken.jp/), and are depositing these lines in the RIKEN BioResource Center (http://www.brc.riken.go. jp/ lab/epd/Eng/). Our collection of these mutants will contribute to progress in functional genomics of plants. JSPP",

keywords = "Ac/Ds, Arabidopsis thaliana, Functional genomics",

author = "Takuya Ito and Reiko Motohashi and Takashi Kuromori and Yoshiteru Noutoshi and Motoaki Seki and Asako Kamiya and Saho Mizukado and Tetsuya Sakurai and Kazuo Shinozaki",

note = "Funding Information: We thank J. Ishida and M. Nakajima for sequencing, T. Hirayama and K. Akiyama for constructing the database, M. Kobayashi for providing us with laboratory space, F. Myouga for discussion, and S. Kawamura and H. Kobayashi for maintaining the greenhouse. This work was supported by a grant for Genome Research from RIKEN, and in part by the Special Coordination Fund of the Science and Technology Agency, and a grant-in-aid from the Ministry of Education, Culture, Sports, Science and Technology of Japan to K.S.",

year = "2005",

month = jul,

doi = "10.1093/pcp/pci112",

language = "English",

volume = "46",

pages = "1149--1153",

journal = "Plant and Cell Physiology",

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publisher = "Oxford University Press",

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T1 - A resource of 5,814 Dissociation transposon-tagged and sequence-indexed lines of Arabidopsis Transposed from start loci on chromosome 5

AU - Ito, Takuya

AU - Motohashi, Reiko

AU - Kuromori, Takashi

AU - Noutoshi, Yoshiteru

AU - Seki, Motoaki

AU - Kamiya, Asako

AU - Mizukado, Saho

AU - Sakurai, Tetsuya

AU - Shinozaki, Kazuo

N1 - Funding Information: We thank J. Ishida and M. Nakajima for sequencing, T. Hirayama and K. Akiyama for constructing the database, M. Kobayashi for providing us with laboratory space, F. Myouga for discussion, and S. Kawamura and H. Kobayashi for maintaining the greenhouse. This work was supported by a grant for Genome Research from RIKEN, and in part by the Special Coordination Fund of the Science and Technology Agency, and a grant-in-aid from the Ministry of Education, Culture, Sports, Science and Technology of Japan to K.S.

PY - 2005/7

Y1 - 2005/7

N2 - We report here the generation of an additional collection of Dissociation (Ds) transposon-tagged, sequence-indexed lines of Arabidopsis thaliana. Our RIKEN Ds insertion collection now totals 17,668 lines. Our collection has preferential insertions in chromosomes 1 and 5, because Ds was transposed from start loci on those chromosomes (11,854 and 5,814 lines, respectively). We describe here features of the latter 5,814 lines. The former 11,854 lines have been described previously. We have created a searchable database of the insertion sites and mutated genes (http:// rarge.gsc.riken.jp/), and are depositing these lines in the RIKEN BioResource Center (http://www.brc.riken.go. jp/ lab/epd/Eng/). Our collection of these mutants will contribute to progress in functional genomics of plants. JSPP

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A resource of 5,814 Dissociation transposon-tagged and sequence-indexed lines of Arabidopsis Transposed from start loci on chromosome 5

Abstract

Keywords

ASJC Scopus subject areas

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