Complete genome sequence data of tumorigenic rhizobium vitis strain VAT03-9, a causal agent of grapevine crown gall disease

Yoshiteru Noutoshi; Atsushi Toyoda; Tomoya Ishii; Kirara Saito; Megumi Watanabe; Akira Kawaguchi

doi:10.1094/MPMI-07-20-0180-A

Complete genome sequence data of tumorigenic rhizobium vitis strain VAT03-9, a causal agent of grapevine crown gall disease

Yoshiteru Noutoshi, Atsushi Toyoda, Tomoya Ishii, Kirara Saito, Megumi Watanabe, Akira Kawaguchi

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Abstract

Rhizobium vitis strain VAT03-9 (MAFF 211676) is a causal agent of crown gall disease in grapevine. It is one of the pathogenic strains of R. vitis isolated from graft unions of grapevine in Okayama Prefecture, Japan. Inoculation tests verified its virulence for gall formation on grapevine, tomato, and sunflower. It harbors tumor-inducing plasmid. Here, we present the complete genome sequence with annotation of R. vitis VAR03-9 obtained by assembling reads from PacBio and Illumina-sequencers. This genome sequence should be useful for the analyses of pathogenicity and evolutionary lineage of the pathogens of crown gall disease.

Original language	English
Pages (from-to)	1280-1282
Number of pages	3
Journal	Molecular Plant-Microbe Interactions
Volume	33
Issue number	11
DOIs	https://doi.org/10.1094/MPMI-07-20-0180-A
Publication status	Published - Nov 2020

Keywords

Bacterial pathogenesis
Crown gall disease
Grapevine
Rhizobium vitis
Tumor-inducing plasmid

ASJC Scopus subject areas

Physiology
Agronomy and Crop Science

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10.1094/MPMI-07-20-0180-A

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title = "Complete genome sequence data of tumorigenic rhizobium vitis strain VAT03-9, a causal agent of grapevine crown gall disease",

abstract = "Rhizobium vitis strain VAT03-9 (MAFF 211676) is a causal agent of crown gall disease in grapevine. It is one of the pathogenic strains of R. vitis isolated from graft unions of grapevine in Okayama Prefecture, Japan. Inoculation tests verified its virulence for gall formation on grapevine, tomato, and sunflower. It harbors tumor-inducing plasmid. Here, we present the complete genome sequence with annotation of R. vitis VAR03-9 obtained by assembling reads from PacBio and Illumina-sequencers. This genome sequence should be useful for the analyses of pathogenicity and evolutionary lineage of the pathogens of crown gall disease. ",

keywords = "Bacterial pathogenesis, Crown gall disease, Grapevine, Rhizobium vitis, Tumor-inducing plasmid",

author = "Yoshiteru Noutoshi and Atsushi Toyoda and Tomoya Ishii and Kirara Saito and Megumi Watanabe and Akira Kawaguchi",

note = "Funding Information: This work was financially supported by Japan Society for the Promotion of Science grant numbers KAKENHI 17H03778 and KAKENHI 20K20572 to A. Kawaguchi and Y. Noutoshi and KAKENHI 16H06279 (Platform for Advanced Genome Science) from the Ministry of Education, Culture, Sports, Science and Technology of Japan. Publisher Copyright: {\textcopyright} 2020 American Chemical Society.",

year = "2020",

month = nov,

doi = "10.1094/MPMI-07-20-0180-A",

language = "English",

volume = "33",

pages = "1280--1282",

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AU - Noutoshi, Yoshiteru

AU - Toyoda, Atsushi

AU - Ishii, Tomoya

AU - Saito, Kirara

AU - Watanabe, Megumi

AU - Kawaguchi, Akira

N1 - Funding Information: This work was financially supported by Japan Society for the Promotion of Science grant numbers KAKENHI 17H03778 and KAKENHI 20K20572 to A. Kawaguchi and Y. Noutoshi and KAKENHI 16H06279 (Platform for Advanced Genome Science) from the Ministry of Education, Culture, Sports, Science and Technology of Japan. Publisher Copyright: © 2020 American Chemical Society.

PY - 2020/11

Y1 - 2020/11

N2 - Rhizobium vitis strain VAT03-9 (MAFF 211676) is a causal agent of crown gall disease in grapevine. It is one of the pathogenic strains of R. vitis isolated from graft unions of grapevine in Okayama Prefecture, Japan. Inoculation tests verified its virulence for gall formation on grapevine, tomato, and sunflower. It harbors tumor-inducing plasmid. Here, we present the complete genome sequence with annotation of R. vitis VAR03-9 obtained by assembling reads from PacBio and Illumina-sequencers. This genome sequence should be useful for the analyses of pathogenicity and evolutionary lineage of the pathogens of crown gall disease.

AB - Rhizobium vitis strain VAT03-9 (MAFF 211676) is a causal agent of crown gall disease in grapevine. It is one of the pathogenic strains of R. vitis isolated from graft unions of grapevine in Okayama Prefecture, Japan. Inoculation tests verified its virulence for gall formation on grapevine, tomato, and sunflower. It harbors tumor-inducing plasmid. Here, we present the complete genome sequence with annotation of R. vitis VAR03-9 obtained by assembling reads from PacBio and Illumina-sequencers. This genome sequence should be useful for the analyses of pathogenicity and evolutionary lineage of the pathogens of crown gall disease.

KW - Bacterial pathogenesis

KW - Crown gall disease

KW - Grapevine

KW - Rhizobium vitis

KW - Tumor-inducing plasmid

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Complete genome sequence data of tumorigenic rhizobium vitis strain VAT03-9, a causal agent of grapevine crown gall disease

Abstract

Keywords

ASJC Scopus subject areas

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