TY - JOUR
T1 - Evaluation of the Geenius HIV 1/2 confirmatory assay for HIV-2 samples isolated in Japan
AU - Japanese Drug Resistance HIV-1 Surveillance Network
AU - Shigemi, Urara
AU - Yamamura, Yoshimi
AU - Matsuda, Masakazu
AU - Okazaki, Reiko
AU - Kubota, Mai
AU - Ibe, Shiro
AU - Nemoto, Michiko
AU - Maejima-Kitagawa, Masami
AU - Sukegawa, Sayaka
AU - Imahashi, Mayumi
AU - Kikuchi, Tadashi
AU - Sugiura, Wataru
AU - Iwatani, Yasumasa
AU - Hachiya, Atsuko
AU - Yokomaku, Yoshiyuki
N1 - Funding Information:
This study was supported in part by the Grant-in Aid for AIDS research from the Ministry of Health Labour and Welfare of Japan under H22-AIDS-004 and H25-AIDS-004 and the Research Programs on HIV/AIDS from the Japan Agency for Medical Research Development, AMED, under 15fk0410002h0003, 16fk0410105h2001, 17fk0410205h2202, 18fk0410005h1903 and 19fk0410028j0001.
Funding Information:
The authors gratefully acknowledge Bio–Rad Laboratories (Tokyo, Japan) for their excellent technical assistance. The authors are grateful to all the participants for the Japanese Drug Resistance Surveillance. Members of the Japanese Drug Resistance HIV-1 Surveillance Network are Sato K (Hokkaido University Graduate School of Medicine), Yoshida S (Health Sciences University of Hokkaido), Ito T (National Hospital Organization Sendai Medical Center), Moro H (Niigata University Graduate School of Medicine), Yoshino Y, Ota Y (Teikyo University School of Medicine), Koga M (Institute of Medical Science, University of Tokyo), Nakajima H, Samukawa S (Yokohama City University Graduate School of Medicine), Hayashida T, Masuda J, Gatanaga H, Oka S (National Center for Global Health and Medicine), Taniguchi T, Igari H (Chiba University Hospital), Uno S, Sudo K, Kato S (Keio University School of Medicine), Yanagisawa K (Gunma University Hospital), Ryu T (Japan Community Health Care Organization Tokyo Yamate Medical Center), Ajisawa A (Tokyo Metropolitan Cancer and Infectious Diseases Center Komagome Hospital), Horiba M (National Hospital Organization Saitama National Hospital), Watanabe T (Ishikawa Prefectural Central Hospital), Watanabe D, Shirasaka T (National Hospital Organization Osaka Medical Center), Takada K (Ehime University Hospital), Minami R, Yamamoto M (National Hospital Organization Kyusyu Medical Center), Nakamura A (Fukuoka Institute of Health and Environmental Sciences), Matsushita S, Ueno T (Kumamoto University Hospital), Tateyama M (University of Ryukyu), Yano K, Takamiya M (Hamamatsu Medical Center), Tsurumi H (Gifu University Hospital), Hatakeyama S (Jichi Medical University Saitama Medical Center), Nagao A (Ogikubo Hospital), Narukawa M (Toyama University Hospital), Nagashima M, Sadamasu K, Yoshimura K (Tokyo Metropolitan Institute of Public Health), Mori H (Osaka Institute of Public Health), Kondo M (Kanagawa Prefectural Institute of Public Health), Uchida K (Saitama Institute of Public Health), and Shiino T, Nishizawa M (National Institute of Infectious Disease).
Publisher Copyright:
© 2022 Elsevier B.V.
PY - 2022/7
Y1 - 2022/7
N2 - Background: Although the number of HIV-2-infected individuals is quite low in Japan, at least three groups of HIV-2 (A, B and CRF01_AB) have been detected thus far. In particular, CRF01_AB HIV-2 cases have been found only in limited areas, Cote d'Ivoire and Japan. Here, we demonstrate that Geenius HIV 1/2 Confirmatory Assay (Geenius, Bio–Rad Laboratories) is able to detect HIV-2 samples, including groups A, B and CRF01_AB, isolated in Japan. Study design: A total of 57 plasma samples, including three panels (Ⅰ: HIV-2-positive samples [n=9], Ⅱ: HIV-1 infection with HIV-2 antibody cross-reactivity samples [n=37], and Ⅲ: HIV negative with biological false-positive HIV-2 samples [n=11]) were tested by Geenius. Results: Geenius determined Panel I to be “HIV-2 positive with/without HIV-1 cross-reactivity (n=4, respectively)”, including HIV-2 group A and CRF01_AB. In the case with HIV-2 group B, all bands were detected, resulting in a Geenius interpretation of “HIV positive untypable”. Geenius classified Panels II and III as “HIV-1 positive (n=37)” or “HIV negative (n=9)”, “HIV indeterminate (n=1)” and “HIV-2 indeterminate (n=1)”, suggesting 95.8% HIV-2 differentiation by Geenius. Conclusions: With Geenius, there were fewer false-positives for HIV-1/-2 negativity and fewer cross-reactions with HIV-2 among HIV-1-positive samples. Additionally, the assay could detect HIV-2 genetic group CRF01_AB. Geenius can be expected to be a useful diagnostic tool that is an alternative to conventional Western blotting.
AB - Background: Although the number of HIV-2-infected individuals is quite low in Japan, at least three groups of HIV-2 (A, B and CRF01_AB) have been detected thus far. In particular, CRF01_AB HIV-2 cases have been found only in limited areas, Cote d'Ivoire and Japan. Here, we demonstrate that Geenius HIV 1/2 Confirmatory Assay (Geenius, Bio–Rad Laboratories) is able to detect HIV-2 samples, including groups A, B and CRF01_AB, isolated in Japan. Study design: A total of 57 plasma samples, including three panels (Ⅰ: HIV-2-positive samples [n=9], Ⅱ: HIV-1 infection with HIV-2 antibody cross-reactivity samples [n=37], and Ⅲ: HIV negative with biological false-positive HIV-2 samples [n=11]) were tested by Geenius. Results: Geenius determined Panel I to be “HIV-2 positive with/without HIV-1 cross-reactivity (n=4, respectively)”, including HIV-2 group A and CRF01_AB. In the case with HIV-2 group B, all bands were detected, resulting in a Geenius interpretation of “HIV positive untypable”. Geenius classified Panels II and III as “HIV-1 positive (n=37)” or “HIV negative (n=9)”, “HIV indeterminate (n=1)” and “HIV-2 indeterminate (n=1)”, suggesting 95.8% HIV-2 differentiation by Geenius. Conclusions: With Geenius, there were fewer false-positives for HIV-1/-2 negativity and fewer cross-reactions with HIV-2 among HIV-1-positive samples. Additionally, the assay could detect HIV-2 genetic group CRF01_AB. Geenius can be expected to be a useful diagnostic tool that is an alternative to conventional Western blotting.
KW - CRF01_AB HIV-2
KW - false positive
KW - HIV-2
KW - HIV1/2 confirmatory assay
KW - Human immunodeficiency virus
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U2 - 10.1016/j.jcv.2022.105189
DO - 10.1016/j.jcv.2022.105189
M3 - Article
C2 - 35640401
AN - SCOPUS:85130893216
SN - 1386-6532
VL - 152
JO - Journal of Clinical Virology
JF - Journal of Clinical Virology
M1 - 105189
ER -