TY - JOUR
T1 - N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
AU - Saeki, Nozomu
AU - Eguchi, Yuichi
AU - Kintaka, Reiko
AU - Makanae, Koji
AU - Shichino, Yuichi
AU - Iwasaki, Shintaro
AU - Kanno, Manabu
AU - Kimura, Nobutada
AU - Moriya, Hisao
N1 - Funding Information:
We thank the members of the Moriya lab for advice and helpful discussions. This work was partly supported by JSPS KAKENHI grant numbers 15KK0258, 17H03618, and 18K19300. This paper is partly based on results obtained from a project commissioned by the New Energy and Industrial Technology Development Organization (NEDO). The funding agencies were not involved in study design, data collection and analysis, decision to publish, or manuscript preparation.
Publisher Copyright:
© 2020, The Author(s).
PY - 2020/12/1
Y1 - 2020/12/1
N2 - Extreme overproduction of gratuitous proteins can overload cellular protein production resources, leading to growth defects, a phenomenon known as the protein burden/cost effect. Genetic screening in the budding yeast Saccharomyces cerevisiae has isolated several dubious ORFs whose deletions mitigated the protein burden effect, but individual characterization thereof has yet to be delineated. We found that deletion of the YJL175W ORF yielded an N-terminal deletion of Swi3, a subunit of the SWI/SNF chromatin remodeling complex, and partial loss of function of Swi3. The deletion mutant showed a reduction in transcription of genes encoding highly expressed, secreted proteins and an overall reduction in translation. Mutations in the chromatin remodeling complex could thus mitigate the protein burden effect, likely by reallocating residual cellular resources used to overproduce proteins. This cellular state might also be related to cancer cells, as they frequently harbor mutations in the SWI/SNF complex.
AB - Extreme overproduction of gratuitous proteins can overload cellular protein production resources, leading to growth defects, a phenomenon known as the protein burden/cost effect. Genetic screening in the budding yeast Saccharomyces cerevisiae has isolated several dubious ORFs whose deletions mitigated the protein burden effect, but individual characterization thereof has yet to be delineated. We found that deletion of the YJL175W ORF yielded an N-terminal deletion of Swi3, a subunit of the SWI/SNF chromatin remodeling complex, and partial loss of function of Swi3. The deletion mutant showed a reduction in transcription of genes encoding highly expressed, secreted proteins and an overall reduction in translation. Mutations in the chromatin remodeling complex could thus mitigate the protein burden effect, likely by reallocating residual cellular resources used to overproduce proteins. This cellular state might also be related to cancer cells, as they frequently harbor mutations in the SWI/SNF complex.
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U2 - 10.1038/s41598-020-66307-z
DO - 10.1038/s41598-020-66307-z
M3 - Article
C2 - 32528012
AN - SCOPUS:85086354621
SN - 2045-2322
VL - 10
JO - Scientific Reports
JF - Scientific Reports
IS - 1
M1 - 9500
ER -