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Synthesis of 3′,4′-difluoro-3′-deoxyribonucleosides and its evaluation of the biological activities: Discovery of a novel type of anti-HCV agent 3′,4′-difluorocordycepin

  • Hisashi Shimada
  • , Kazuhiro Haraguchi
  • , Kumi Hotta
  • , Tomoko Miyaike
  • , Yasuyuki Kitagawa
  • , Hiromichi Tanaka
  • , Ryutaro Kaneda
  • , Hiroshi Abe
  • , Satoshi Shuto
  • , Kyoko Mori
  • , Youki Ueda
  • , Nobuyuki Kato
  • , Robert Snoeck
  • , Graciela Andrei
  • , Jan Balzarini

Research output: Contribution to journalArticlepeer-review

Abstract

Upon reacting 3′,4′-unsaturated cytosine (8 and 9) and adenine nucleosides (13 and 14) with XeF2/BF3·OEt2, the respective novel 3′,4′-difluoro-3′-deoxyribofuranosyl nucleosides (10-12 and 15-18) could be obtained. Formation of anti-adducts (11, 16 and 18) revealed that the fluorination involved oxonium ions as incipient intermediates. TBDMS-protected 3′,4′-unsaturated adenosine provided the β-face adducts as sole stereoisomers whereas α-face-selectivity was observed with the TBDPS-protected adenosine 14. The evaluation of the novel 3′-deoxy-3′,4′-difluororibofuranosylcytosine-(19-21) and adenine nucleosides (22-25) against antitumor and antiviral activities revealed that 3′,4′-difluorocordycepin (24) was found to possess anti-HCV activity. The SI of 24 was comparable to that of the anti-HCV drug ribavirin. However, sofosbuvir, FDA-approved novel anti-HCV drug, showed better SI value. Our finding revealed that the introduction of the fluoro-substituent into the 4′-position of cordycepin derivatives decreased the cytotoxicity to the host cell with retention of the antiviral activity.

Original languageEnglish
Pages (from-to)6174-6182
Number of pages9
JournalBioorganic and Medicinal Chemistry
Volume22
Issue number21
DOIs
Publication statusPublished - Nov 1 2014

Keywords

  • Anti-HCV agent Molecular orbital calculation
  • Cordycepin
  • Fluorinated sugar
  • Nucleoside
  • Unsaturated sugar

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Medicine
  • Molecular Biology
  • Pharmaceutical Science
  • Drug Discovery
  • Clinical Biochemistry
  • Organic Chemistry

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