資源植物科学研究所

2023

2023 Awards in the Journal of Plant Research

Katsuhara, M., 2023, (Accepted/In press) In: Journal of Plant Research.

研究成果 › 査読

Open Access

Ab-GALFA, A bioassay for insect gall formation using the model plant Arabidopsis thaliana

Hirano, T., Okamoto, A., Oda, Y., Sakamoto, T., Takeda, S., Matsuura, T., Ikeda, Y., Higaki, T., Kimura, S. & Sato, M. H., 12月 2023, In: Scientific reports. 13, 1, 2554.

研究成果 › 査読

Open Access

A metabolome genome-wide association study implicates histidine N-pi-methyltransferase as a key enzyme in N-methylhistidine biosynthesis in Arabidopsis thaliana

Uchida, K., Kim, J. S., Sato, M., Tabeta, H., Mochida, K. & Hirai, M. Y., 2023, In: Frontiers in Plant Science. 14, 1201129.

研究成果 › 査読

Open Access

Application of Trehalose Mitigates Short-Styled Flowers in Solanaceous Crops

Mori, I. C., Matsuura, T., Otao, M., Ooi, L., Nishimura, Y. & Hirayama, T., 4月 12 2023, In: Journal of agricultural and food chemistry. 71, 14, p. 5476-5482 7 p.

研究成果 › 査読

Open Access

A silicon transporter gene required for healthy growth of rice on land

Mitani-Ueno, N., Yamaji, N., Sheng, H., Yoshioka, Y., Miyaji, T. & Ma, J. F., 12月 2023, In: Nature communications. 14, 1, 6522.

研究成果 › 査読

Open Access

Barley varieties tolerant to waterlogged reduced soil show the better root growth in hypoxia

Abiko, T., Todoroki, T., Pham Thi Thanh, H., Nakamura, T., Haraguchi, Y., Tanaka, T., Saisho, D. & Kai, H., 2023, (Accepted/In press) In: Plant Production Science.

研究成果 › 査読

Open Access

Beneficial elements

Ma, J. F., Zhao, F. J., Rengel, Z. & Cakmak, I., 1月 1 2023, Marschner's Mineral Nutrition of Plants. Elsevier, p. 387-418 32 p.

研究成果

BSR1, a Rice Receptor-like Cytoplasmic Kinase, Positively Regulates Defense Responses to Herbivory

Kanda, Y., Shinya, T., Maeda, S., Mujiono, K., Hojo, Y., Tomita, K., Okada, K., Kamakura, T., Galis, I. & Mori, M., 6月 2023, In: International journal of molecular sciences. 24, 12, 10395.

研究成果 › 査読

Open Access

1 被引用数 (Scopus)

Capsid structure of a fungal dsRNA megabirnavirus reveals its previously unidentified surface architecture

Wang, H., Salaipeth, L., Miyazaki, N., Suzuki, N. & Okamoto, K., 2月 2023, In: PLoS Pathogens. 19, 2, e1011162.

研究成果 › 査読

Open Access

2 被引用数 (Scopus)

Comparative analysis of sorghum (C4) and rice (C3) plant headspace volatiles induced by artificial herbivory

Osinde, C., Sobhy, I. S., Wari, D., Dinh, S. T., Hojo, Y., Osibe, D. A., Shinya, T., Tugume, A. K., Nsubuga, A. M. & Galis, I., 2023, (Accepted/In press) In: Plant Signaling and Behavior. 2243064.

研究成果 › 査読

Open Access

Corrigendum to: Tetranins: new putative spider mite elicitors of host plant defense (New Phytologist, (2019), 224, 2, (875-885), 10.1111/nph.15813)

Iida, J., Desaki, Y., Hata, K., Uemura, T., Yasuno, A., Islam, M., Maffei, M. E., Ozawa, R., Nakajima, T., Galis, I. & Arimura, G. I., 2023, (Accepted/In press) In: New Phytologist.

研究成果 › 査読

Open Access

Corrigendum to ‘A new tetra-segmented splipalmivirus with divided RdRP domains from Cryphonectria naterciae, a fungus found on chestnut and cork oak trees in Europe’ [Virus Research 291 (2021) 198221] (Virus Research (2022) 307, (S0168170221003130), (10.1016/j.virusres.2021.198606))

Sato, Y., Shahi, S., Telengech, P., Hisano, S., Cornejo, C., Rigling, D., Kondo, H. & Suzuki, N., 11月 2023, In: Virus research. 337, 199228.

研究成果 › 査読

Open Access

Corrigendum to ‘A new tetra-segmented splipalmivirus with divided RdRP domains from Cryphonectria naterciae, a fungus found on chestnut and cork oak trees in Europe’ [Virus Research 307 (2022) 198606](S0168170221003130)(10.1016/j.virusres.2021.198606)

Sato, Y., Shahi, S., Telengech, P., Hisano, S., Cornejo, C., Rigling, D., Kondo, H. & Suzuki, N., 1月 15 2023, In: Virus research. 324, 199013.

研究成果 › 査読

Open Access

CRISPR/Cas9-based generation of mlo mutants for allelic complementation experiments to elucidate MLO function in barley

Koide, H., Hisano, H. & Yaeno, T., 5月 2023, In: Journal of General Plant Pathology. 89, 3, p. 153-158 6 p.

研究成果 › 査読

CRISPR-FISH: A CRISPR/Cas9-Based In Situ Labeling Method

Potlapalli, B. P., Ishii, T., Nagaki, K., Somasundaram, S. & Houben, A., 2023, Methods in Molecular Biology. Humana Press Inc., p. 315-335 21 p. (Methods in Molecular Biology; vol. 2672).

研究成果

Discovery and Genome Characterization of a Closterovirus from Wheat Plants with Yellowing Leaf Symptoms in Japan

Kondo, H., Sugahara, H., Fujita, M., Hyodo, K., Ida Bagus, A., Hisano, H. & Suzuki, N., 3月 2023, In: Pathogens. 12, 3, 358.

研究成果 › 査読

Open Access

Exome-wide variation in a diverse barley panel reveals genetic associations with ten agronomic traits in Eastern landraces

Kim, J. S., Takahagi, K., Inoue, K., Shimizu, M., Uehara-Yamaguchi, Y., Kanatani, A., Saisho, D., Nishii, R., Lipka, A. E., Hirayama, T., Sato, K. & Mochida, K., 2023, (Accepted/In press) In: Journal of Genetics and Genomics.

研究成果 › 査読

Open Access

1 被引用数 (Scopus)

Exploration of the yadokari/yadonushi nature of YkV3 and RnMBV3 in the original host and a model filamentous fungus

Sato, Y., Hisano, S. & Suzuki, N., 9月 2023, In: Virus research. 334, 199155.

研究成果 › 査読

Open Access

FLOURY ENDOSPERM 6 mutations enhance the sugary phenotype caused by the loss of ISOAMYLASE1 in barley

Matsushima, R., Hisano, H., Galis, I., Miura, S., Crofts, N., Takenaka, Y., Oitome, N. F., Ishimizu, T., Fujita, N. & Sato, K., 4月 2023, In: Theoretical and Applied Genetics. 136, 4, 94.

研究成果 › 査読

Open Access

Four principles to establish a universal virus taxonomy

Simmonds, P., Adriaenssens, E. M., Murilo Zerbini, F., Abrescia, N. G. A., Aiewsakun, P., Alfenas-Zerbini, P., Bao, Y., Barylski, J., Drosten, C., Duffy, S., Paul Duprex, W., Dutilh, B. E., Elena, S. F., García, M. L., Junglen, S., Katzourakis, A., Koonin, E. V., Krupovic, M., Kuhn, J. H., Lambert, A. J., & 23 othersLefkowitz, E. J., Łobocka, M., Lood, C., Mahony, J., Meier-Kolthoff, J. P., Mushegian, A. R., Oksanen, H. M., Poranen, M. M., Reyes-Muñoz, A., Robertson, D. L., Roux, S., Rubino, L., Sabanadzovic, S., Siddell, S., Skern, T., Smith, D. B., Sullivan, M. B., Suzuki, N., Turner, D., Van Doorslaer, K., Vandamme, A. M., Varsani, A. & Vasilakis, N., 2月 2023, In: PLoS biology. 21, 2, e3001922.

研究成果 › 査読

Open Access

14 被引用数 (Scopus)

FZL, a dynamin-like protein localized to curved grana edges, is required for efficient photosynthetic electron transfer in Arabidopsis

Ogawa, Y., Iwano, M., Shikanai, T. & Sakamoto, W., 2023, In: Frontiers in Plant Science. 14, 1279699.

研究成果 › 査読

Open Access

GBScleanR: robust genotyping error correction using a hidden Markov model with error pattern recognition

Furuta, T., Yamamoto, T. & Ashikari, M., 6月 2023, In: Genetics. 224, 2, iyad055.

研究成果 › 査読

Open Access

1 被引用数 (Scopus)

Genetic diversity and population structure of barley landraces from Southern Ethiopia’s Gumer district: Utilization for breeding and conservation

Degu, H. D., Tehelku, T. F., Kalousova, M. & Sato, K., 1月 2023, In: PloS one. 18, 1 January, e0279737.

研究成果 › 査読

Open Access

1 被引用数 (Scopus)

Genetic variation for grain nutritional profile and yield potential in sorghum and the possibility of selection for drought tolerance under irrigated conditions

Kamal, N. M., Gorafi, Y. S. A., Tomemori, H., Kim, J. S., Elhadi, G. M. I. & Tsujimoto, H., 12月 2023, In: BMC Genomics. 24, 1, 515.

研究成果 › 査読

Open Access

Glucosylation prevents autotoxicity of stress inducible DOPA in maize seedlings

Aboshi, T., Ittou, K., Galis, I., Shinya, T. & Murayama, T., 2023, (Accepted/In press) In: Plant Growth Regulation.

研究成果 › 査読

ICTV Virus Taxonomy Profile: Hypoviridae 2023

Chiba, S., Velasco, L., Ayllón, M. A., Suzuki, N., Lee-Marzano, S. Y., Sun, L., Sabanadzovic, S. & Turina, M., 2023, In: Journal of General Virology. 104, 5, 001848.

研究成果 › 査読

Open Access

2 被引用数 (Scopus)

ICTV Virus Taxonomy Profile: Yadokariviridae 2023

ICTV Report Consortium, 2023, In: Journal of General Virology. 104, 1, 001826.

研究成果 › 査読

Open Access

4 被引用数 (Scopus)

ICTV Virus Taxonomy Profile: Hadakaviridae 2023

Sato, Y., Turina, M., Chiba, S., Okada, R., Bhatti, M. F., Kotta-Loizou, I., Coutts, R. H. A., Kondo, H., Sabanadzovic, S., Suzuki, N. & Ictv Report Consortium, R. C., 1月 1 2023, In: The Journal of general virology. 104, 1

研究成果 › 査読

Open Access

2 被引用数 (Scopus)

Identification of quantitative trait loci associated with sorghum susceptibility to Asian stem borer damage

Osinde, C., Sakamoto, W., Kajiya-Kanegae, H., Sobhy, I. S., Tugume, A. K., Nsubuga, A. M. & Galis, I., 2023, In: Journal of Plant Interactions. 18, 1, 2153182.

研究成果 › 査読

Open Access

1 被引用数 (Scopus)

In planta evidence that the HAK transporter OsHAK2 is involved in Na+ transport in rice

Morita, S., Tamba, N., Shibasaka, M., Sasano, S., Kadoike, T., Urase, Y., Maruyama, M., Fukuoka, A., Yanai, J., Masumura, T., Ogihara, Y., Satoh, S., Tanaka, K., Katsuhara, M. & Nakayama, H., 4月 24 2023, In: Bioscience, biotechnology, and biochemistry. 87, 5, p. 482-490 9 p.

研究成果 › 査読

Lettuce tolerance to verticillium wilt after inoculation with Penicillium pinophilum and Rhizophagus intraradices

Ibiang, S. R., Usami, T., Sakamoto, K. & Ibiang, Y. B., 11月 2023, In: Physiological and Molecular Plant Pathology. 128, 102171.

研究成果 › 査読

Maternal plastid inheritance: two abating factors identified

Sakamoto, W. & Takami, T., 5月 2023, In: Trends in Genetics. 39, 5, p. 342-343 2 p.

研究成果 › 査読

Metabolic and transcriptomic profiling during wheat seed development under progressive drought conditions

Mega, R., Kim, J. S., Tanaka, H., Ishii, T., Abe, F. & Okamoto, M., 12月 2023, In: Scientific reports. 13, 1, 15001.

研究成果 › 査読

Open Access

Molecular identification of a laccase that catalyzes the oxidative coupling of a hydroxycinnamic acid amide for hordatine biosynthesis in barley

Ube, N., Ishihara, A., Yabuta, Y., Taketa, S., Kato, Y. & Nomura, T., 2023, (Accepted/In press) In: Plant Journal.

研究成果 › 査読

New Year’s greetings 2023 from the Journal of Plant Research

Katsuhara, M., 1月 2023, In: Journal of Plant Research. 136, 1, p. 1-2 2 p.

研究成果 › 査読

Open Access

Optimizing genome editing efficiency in wheat: Effects of heat treatments and different promoters for single guide RNA expression

Kishi-Kaboshi, M., Abe, F., Kamiya, Y., Kawaura, K., Hisano, H. & Sato, K., 2023, In: Plant Biotechnology. 40, 3, p. 237-245 9 p.

研究成果 › 査読

1 被引用数 (Scopus)

Phenotypic effects of A^m genomes in nascent synthetic hexaploids derived from interspecific crosses between durum and wild einkorn wheat

Michikawa, A., Okada, M., Ikeda, T. M., Nagaki, K., Yoshida, K. & Takumi, S., 4月 2023, In: PloS one. 18, 4 April, e0284408.

研究成果 › 査読

Open Access

Phylogeography of the temperate grassland plant Tephroseris kirilowii (Asteraceae) inferred from multiplexed inter-simple sequence repeat genotyping by sequencing (MIG-seq) data

Sakaba, T., Soejima, A., Fujii, S., Ikeda, H., Iwasaki, T., Saito, H., Suyama, Y., Matsuo, A., Kozhevnikov, A. E., Kozhevnikova, Z. V., Wang, H., Wang, S., Pak, J. H. & Fujii, N., 7月 2023, In: Journal of Plant Research. 136, 4, p. 437-452 16 p.

研究成果 › 査読

1 被引用数 (Scopus)

Plant Hormonomics: A Key Tool for Deep Physiological Phenotyping to Improve Crop Productivity

Hirayama, T. & Mochida, K., 1月 30 2023, In: Plant & cell physiology. 63, 12, p. 1826-1839 14 p.

研究成果 › 査読

Open Access

6 被引用数 (Scopus)

Polar localization of a rice silicon transporter requires isoleucine at both C- And N-termini as well as positively charged residues

Konishi, N., Mitani-Ueno, N., Yamaji, N. & Ma, J. F., 6月 2023, In: Plant Cell. 35, 6, p. 2232-2250 19 p.

研究成果 › 査読

3 被引用数 (Scopus)

Preparation and application of cinnamon-Litsea cubeba compound essential oil microcapsules for peanut kernel postharvest storage

Lv, H., Huo, S., Zhao, L., Zhang, H., Liu, Y., Liu, S., Tani, A. & Wang, R., 7月 30 2023, In: Food Chemistry. 415, 135734.

研究成果 › 査読

3 被引用数 (Scopus)

Sequence and phylogenetic analysis of a novel alphaendornavirus, the first virus described from the oomycete plant pathogen Phytophthora heveae

Raco, M., Jung, T., Horta Jung, M., Chi, N. M., Botella, L. & Suzuki, N., 6月 2023, In: Archives of Virology. 168, 6, 158.

研究成果 › 査読

Open Access

Spatio-temporal clustering analysis using generalized lasso with an application to reveal the spread of Covid-19 cases in Japan

Rahardiantoro, S. & Sakamoto, W., 2023, (Accepted/In press) In: Computational Statistics.

研究成果 › 査読

Open Access

The dataset of de novo assembly and inferred functional annotation of the transcriptome of Heterosigma akashiwo, a bloom-forming, cosmopolitan raphidophyte

Sato, M., Seki, M., Suzuki, Y. & Ueki, S., 6月 2023, In: Data in Brief. 48, 109071.

研究成果 › 査読

Open Access

The holobiome of marine harmful algal blooms (HABs): A novel ecosystem-based approach for implementing predictive capabilities and managing decisions

Gajardo, G., Morón-López, J., Vergara, K., Ueki, S., Guzmán, L., Espinoza-González, O., Sandoval, A., Fuenzalida, G., Murillo, A. A., Riquelme, C., Camerón, H., Nagai, S., Maruyama, F., Fujiyoshi, S., Yarimizu, K., Perera, I., Kawai, M., Ávila, A., Larama, G., Gonzalez, M. A., & 6 othersRilling, J. I., Campos, M., Ruiz-Gil, T., Durán-Vinet, B., Acuña, J. J. & Jorquera, M. A., 5月 2023, In: Environmental Science and Policy. 143, p. 44-54 11 p.

研究成果 › 査読

2 被引用数 (Scopus)

The simplest RNA replicons, viroids: A tribute to Ricardo Flores

Pallas, V., Serio, F. D. & Suzuki, N., 1月 2 2023, In: Virus research. 323, 198996.

研究成果 › 査読

Open Access

Virus taxonomy and the role of the International Committee on Taxonomy of Viruses (ICTV)

Siddell, S. G., Smith, D. B., Adriaenssens, E., Alfenas-Zerbini, P., Dutilh, B. E., Garcia, M. L., Junglen, S., Krupovic, M., Kuhn, J. H., Lambert, A. J., Lefkowitz, E. J., Łobocka, M., Mushegian, A. R., Oksanen, H. M., Robertson, D. L., Rubino, L., Sabanadzovic, S., Simmonds, P., Suzuki, N., Van Doorslaer, K., & 3 othersVandamme, A. M., Varsani, A. & Zerbini, F. M., 5月 1 2023, In: The Journal of general virology. 104, 5

研究成果 › 査読

Open Access

7 被引用数 (Scopus)

Zinc deficiency-induced defensin-like proteins are involved in the inhibition of root growth in Arabidopsis

Kimura, S., Vaattovaara, A., Ohshita, T., Yokoyama, K., Yoshida, K., Hui, A., Kaya, H., Ozawa, A., Kobayashi, M., Mori, I. C., Ogata, Y., Ishino, Y., Sugano, S. S., Nagano, M. & Fukao, Y., 2023, (Accepted/In press) In: Plant Journal.

研究成果 › 査読

2022

2022 Awards in the Journal of Plant Research

Katsuhara, M., 7月 2022, In: Journal of Plant Research. 135, 4, p. 537-538 2 p.

研究成果 › 査読

Open Access

2022 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Kuhn, J. H., Adkins, S., Alkhovsky, S. V., Avšič-Županc, T., Ayllón, M. A., Bahl, J., Balkema-Buschmann, A., Ballinger, M. J., Bandte, M., Beer, M., Bejerman, N., Bergeron, É., Biedenkopf, N., Bigarré, L., Blair, C. D., Blasdell, K. R., Bradfute, S. B., Briese, T., Brown, P. A., Bruggmann, R., & 161 othersBuchholz, U. J., Buchmeier, M. J., Bukreyev, A., Burt, F., Büttner, C., Calisher, C. H., Candresse, T., Carson, J., Casas, I., Chandran, K., Charrel, R. N., Chiaki, Y., Crane, A., Crane, M., Dacheux, L., Bó, E. D., de la Torre, J. C., de Lamballerie, X., de Souza, W. M., de Swart, R. L., Dheilly, N. M., Di Paola, N., Di Serio, F., Dietzgen, R. G., Digiaro, M., Drexler, J. F., Duprex, W. P., Dürrwald, R., Easton, A. J., Elbeaino, T., Ergünay, K., Feng, G., Feuvrier, C., Firth, A. E., Fooks, A. R., Formenty, P. B. H., Freitas-Astúa, J., Gago-Zachert, S., García, M. L., García-Sastre, A., Garrison, A. R., Godwin, S. E., Gonzalez, J. P. J., de Bellocq, J. G., Griffiths, A., Groschup, M. H., Günther, S., Hammond, J., Hepojoki, J., Hierweger, M. M., Hongō, S., Horie, M., Horikawa, H., Hughes, H. R., Hume, A. J., Hyndman, T. H., Jiāng, D., Jonson, G. B., Junglen, S., Kadono, F., Karlin, D. G., Klempa, B., Klingström, J., Koch, M. C., Kondō, H., Koonin, E. V., Krásová, J., Krupovic, M., Kubota, K., Kuzmin, I. V., Laenen, L., Lambert, A. J., Lǐ, J., Li, J. M., Lieffrig, F., Lukashevich, I. S., Luo, D., Maes, P., Marklewitz, M., Marshall, S. H., Marzano, S. Y. L., McCauley, J. W., Mirazimi, A., Mohr, P. G., Moody, N. J. G., Morita, Y., Morrison, R. N., Mühlberger, E., Naidu, R., Natsuaki, T., Navarro, J. A., Neriya, Y., Netesov, S. V., Neumann, G., Nowotny, N., Ochoa-Corona, F. M., Palacios, G., Pallandre, L., Pallás, V., Papa, A., Paraskevopoulou, S., Parrish, C. R., Pauvolid-Corrêa, A., Pawęska, J. T., Pérez, D. R., Pfaff, F., Plemper, R. K., Postler, T. S., Pozet, F., Radoshitzky, S. R., Ramos-González, P. L., Rehanek, M., Resende, R. O., Reyes, C. A., Romanowski, V., Rubbenstroth, D., Rubino, L., Rumbou, A., Runstadler, J. A., Rupp, M., Sabanadzovic, S., Sasaya, T., Schmidt-Posthaus, H., Schwemmle, M., Seuberlich, T., Sharpe, S. R., Shi, M., Sironi, M., Smither, S., Song, J. W., Spann, K. M., Spengler, J. R., Stenglein, M. D., Takada, A., Tesh, R. B., Těšíková, J., Thornburg, N. J., Tischler, N. D., Tomitaka, Y., Tomonaga, K., Tordo, N., Tsunekawa, K., Turina, M., Tzanetakis, I. E., Vaira, A. M., van den Hoogen, B., Vanmechelen, B., Vasilakis, N., Verbeek, M., von Bargen, S., Wada, J., Wahl, V., Walker, P. J., Whitfield, A. E., Williams, J. V., Wolf, Y. I., Yamasaki, J., Yanagisawa, H., Ye, G., Zhang, Y. Z. & Økland, A. L., 12月 2022, In: Archives of Virology. 167, 12, p. 2857-2906 50 p.

研究成果 › 査読

Open Access

20 被引用数 (Scopus)

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